Add watermarks to all notebooks and fix images

docs/learning/02 Packaging It Up.ipynb

@@ -155,13 +155,49 @@
     "\n",
     "<img style=\"max-width:700px;margin:auto;\" src = \"https://imgs.xkcd.com/comics/python_environment.png\" alt = \"An xkcd comic with a diagram of p values, saying that small ones are highly significant and giving humorous excuses for why larger ones are still intersting\">"
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 1,
+   "id": "c4752c3c-5550-4052-bcef-0683460cd010",
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "Author: Thomas Hodson\n",
+      "\n",
+      "Github username: T_Hodson\n",
+      "\n",
+      "Last updated: Mon Jul 18 2022\n",
+      "\n",
+      "Python implementation: CPython\n",
+      "Python version       : 3.9.12\n",
+      "IPython version      : 8.4.0\n",
+      "\n",
+      "Git hash: 03657e08835fdf23a808f59baa6c6a9ad684ee55\n",
+      "\n",
+      "Git repo: https://github.com/ImperialCollegeLondon/ReCoDE_MCMCFF.git\n",
+      "\n",
+      "Git branch: main\n",
+      "\n",
+      "Watermark: 2.3.1\n",
+      "\n"
+     ]
+    }
+   ],
+   "source": [
+    "%load_ext watermark\n",
+    "%watermark -n -u -v -iv -w -g -r -b -a \"Thomas Hodson\" -gu \"T_Hodson\""
+   ]
   }
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python [conda env:jupyter3.9] *",
+   "display_name": "Python [conda env:recode]",
    "language": "python",
-   "name": "conda-env-jupyter3.9-py"
+   "name": "conda-env-recode-py"
   },
   "language_info": {
    "codemirror_mode": {
@@ -173,7 +209,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.9.7"
+   "version": "3.9.12"
   }
  },
  "nbformat": 4,

docs/learning/05 Adding Functionality.ipynb

@@ -127,7 +127,7 @@
     {
      "data": {
       "text/plain": [
-       "(<generator object my_range at 0x7fe3b2359660>, [0, 1, 2, 3, 4, 5, 6, 7, 8, 9])"
+       "(<generator object my_range at 0x7fcaff25da50>, [0, 1, 2, 3, 4, 5, 6, 7, 8, 9])"
       ]
      },
      "execution_count": 2,
@@ -158,7 +158,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": 3,
    "id": "f73d6335-6514-45b1-9128-d72122d8b0b7",
    "metadata": {},
    "outputs": [
@@ -166,9 +166,9 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "18.4 ms ± 364 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n",
-      "9.51 ms ± 309 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n",
-      "0x slowdown!\n"
+      "18.6 ms ± 645 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n",
+      "13.3 ms ± 1.74 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n",
+      "1x slowdown!\n"
      ]
     }
    ],
@@ -217,6 +217,46 @@
     "\n",
     "We take a factor of two slowdown but that doesn't seem so much to pay for the fact we can now sample the state at every single step rather than just the last."
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 4,
+   "id": "b4e3c207-bc11-483a-aaf6-2daebb3194d8",
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "Author: Thomas Hodson\n",
+      "\n",
+      "Github username: T_Hodson\n",
+      "\n",
+      "Last updated: Mon Jul 18 2022\n",
+      "\n",
+      "Python implementation: CPython\n",
+      "Python version       : 3.9.12\n",
+      "IPython version      : 8.4.0\n",
+      "\n",
+      "Git hash: 03657e08835fdf23a808f59baa6c6a9ad684ee55\n",
+      "\n",
+      "Git repo: https://github.com/ImperialCollegeLondon/ReCoDE_MCMCFF.git\n",
+      "\n",
+      "Git branch: main\n",
+      "\n",
+      "json      : 2.0.9\n",
+      "numpy     : 1.21.5\n",
+      "matplotlib: 3.5.1\n",
+      "\n",
+      "Watermark: 2.3.1\n",
+      "\n"
+     ]
+    }
+   ],
+   "source": [
+    "%load_ext watermark\n",
+    "%watermark -n -u -v -iv -w -g -r -b -a \"Thomas Hodson\" -gu \"T_Hodson\""
+   ]
   }
  ],
  "metadata": {