docs: update README.md

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@ -36,7 +36,7 @@ Rather this project is primarily designed to showcase the tools and practices av
## How to use this repository
Take a look at a the table of contents below and see if there are any topics that might be useful to you. The actual code lives in `./code` and the documentation in `./docs/learning`
Take a look at the table of contents below and see if there are any topics that might be useful to you. The actual code lives in `src` and the documentation in `docs/learning` in the form of Jupyter notebooks.
When you're ready to dive in you have three options:
@ -44,12 +44,12 @@ When you're ready to dive in you have three options:
[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/ImperialCollegeLondon/ReCoDE_MCMCFF/HEAD?urlpath=lab%2Ftree%2Fdocs%2Flearning%2F01%20Introduction.ipynb)
### 2. Clone the repo and run the jupyter notebooks locally. (Faster but requires you have python/jupyter installed)
### 2. Clone the repo and run the Jupyter notebooks locally. (Faster but requires you have python/jupyter installed)
```
git clone
cd
pip install -r requirements.txt
```bash
git clone https://github.com/ImperialCollegeLondon/ReCoDE_MCMCFF mcmc
cd mcmc
pip install .[dev]
jupyter lab
```
@ -65,7 +65,7 @@ jupyter lab
├── docs
│ ├── ... #Files to do with making the documentation
│ └── learning
│ └── #The Jupyer notebooks that form the main body of this project
│ └── #The Jupyter notebooks that form the main body of this project
├── pyproject.toml # Machine readable information about the MCFF package
├── readthedocs.yaml # Tells readthedocs.com how to build the documentation