Start setting up tree_traverser

This commit is contained in:
Tom Hodson 2024-11-22 14:30:47 +00:00
parent e07c06b1ee
commit 25ff51c71e
14 changed files with 882 additions and 20 deletions

View File

@ -1,32 +1,21 @@
![Static Badge](https://img.shields.io/badge/ESEE-Production_Chain-blue?style=flat&label=ESEE&link=github.com%2Fecmwf)
![Static Badge](https://img.shields.io/badge/ESEE-Data_Provision-purple?style=flat&label=ESEE&link=github.com%2Fecmwf)
![Static Badge](https://img.shields.io/badge/ESEE-User_Interaction-green?style=flat&label=ESEE&link=github.com%2Fecmwf)
![Static Badge](https://img.shields.io/badge/ESEE-Foundation-orange?style=flat&label=ESEE&link=github.com%2Fecmwf)
# Q<sup>3</sup> Quick Querying of Qubes
This repostitory contains a collection of components designed to deliver user friendly cataloging for ecmwf's data. The STAC Server, Frontend and a periodic job to do tree compression can be deployed together to kubernetes using the [helm chart](./helm_chart). Thise deployment can then be accessed either via the Query Builder Web interface or the python client.
## 📦 Components Overview
### 🌲 [Tree Compressor](./tree_compresser)
> **Python/Rust Package**
📋 Lists the datasets in an **FDB** and converts the output into a **compressed tree representation** for fast querying.
---
### 🚀 [STAC Server](./stac_server)
### 🚀 [Qubed STAC Server](./stac_server)
> **FastAPI STAC Server Backend**
- 🌟 Implements our proposed [Datacube STAC Extension](./structured_stac.md).
- 🛠️ Allows efficient traversal of ECMWF's datacubes.
- 🔗 **[Live Example](http://catalogue.lumi.apps.dte.destination-earth.eu/stac?class=d1&dataset=extremes-dt&expver=0001&stream=oper)**.
- Part of the implementation of this is [🌲 Tree Compressor](./tree_compresser), a **compressed tree representation** optimised for storing trees with many duplicated subtress.
- 🔗 **[Live Example]()**.
---
### 🌐 [Web Query Builder](./web_query_builder)
### 🌐 [Qubed Web Query Builder](./web_query_builder)
> **Web Frontend**
- 👀 Displays data from the **STAC Server** in an intuitive user interface.
@ -34,7 +23,7 @@ This repostitory contains a collection of components designed to deliver user fr
---
### TODO: 🐍 [Python Query Builder](./python_query_builder)
### TODO: 🐍 [Qubed Python Query Builder](./python_query_builder)
> **Python Client**
- 🤖 A Python client for the **STAC Server**.

72
tree_compresser/.gitignore vendored Normal file
View File

@ -0,0 +1,72 @@
/target
# Byte-compiled / optimized / DLL files
__pycache__/
.pytest_cache/
*.py[cod]
# C extensions
*.so
# Distribution / packaging
.Python
.venv/
env/
bin/
build/
develop-eggs/
dist/
eggs/
lib/
lib64/
parts/
sdist/
var/
include/
man/
venv/
*.egg-info/
.installed.cfg
*.egg
# Installer logs
pip-log.txt
pip-delete-this-directory.txt
pip-selfcheck.json
# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.cache
nosetests.xml
coverage.xml
# Translations
*.mo
# Mr Developer
.mr.developer.cfg
.project
.pydevproject
# Rope
.ropeproject
# Django stuff:
*.log
*.pot
.DS_Store
# Sphinx documentation
docs/_build/
# PyCharm
.idea/
# VSCode
.vscode/
# Pyenv
.python-version

589
tree_compresser/Cargo.lock generated Normal file
View File

@ -0,0 +1,589 @@
# This file is automatically @generated by Cargo.
# It is not intended for manual editing.
version = 3
[[package]]
name = "aho-corasick"
version = "1.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8e60d3430d3a69478ad0993f19238d2df97c507009a52b3c10addcd7f6bcb916"
dependencies = [
"memchr",
]
[[package]]
name = "anstream"
version = "0.6.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8acc5369981196006228e28809f761875c0327210a891e941f4c683b3a99529b"
dependencies = [
"anstyle",
"anstyle-parse",
"anstyle-query",
"anstyle-wincon",
"colorchoice",
"is_terminal_polyfill",
"utf8parse",
]
[[package]]
name = "anstyle"
version = "1.0.10"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "55cc3b69f167a1ef2e161439aa98aed94e6028e5f9a59be9a6ffb47aef1651f9"
[[package]]
name = "anstyle-parse"
version = "0.2.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3b2d16507662817a6a20a9ea92df6652ee4f94f914589377d69f3b21bc5798a9"
dependencies = [
"utf8parse",
]
[[package]]
name = "anstyle-query"
version = "1.1.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "79947af37f4177cfead1110013d678905c37501914fba0efea834c3fe9a8d60c"
dependencies = [
"windows-sys 0.59.0",
]
[[package]]
name = "anstyle-wincon"
version = "3.0.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2109dbce0e72be3ec00bed26e6a7479ca384ad226efdd66db8fa2e3a38c83125"
dependencies = [
"anstyle",
"windows-sys 0.59.0",
]
[[package]]
name = "autocfg"
version = "1.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ace50bade8e6234aa140d9a2f552bbee1db4d353f69b8217bc503490fc1a9f26"
[[package]]
name = "cc"
version = "1.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fd9de9f2205d5ef3fd67e685b0df337994ddd4495e2a28d185500d0e1edfea47"
dependencies = [
"shlex",
]
[[package]]
name = "cfg-if"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"
[[package]]
name = "clap"
version = "4.5.21"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fb3b4b9e5a7c7514dfa52869339ee98b3156b0bfb4e8a77c4ff4babb64b1604f"
dependencies = [
"clap_builder",
"clap_derive",
]
[[package]]
name = "clap_builder"
version = "4.5.21"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b17a95aa67cc7b5ebd32aa5370189aa0d79069ef1c64ce893bd30fb24bff20ec"
dependencies = [
"anstream",
"anstyle",
"clap_lex",
"strsim",
]
[[package]]
name = "clap_derive"
version = "4.5.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4ac6a0c7b1a9e9a5186361f67dfa1b88213572f427fb9ab038efb2bd8c582dab"
dependencies = [
"heck",
"proc-macro2",
"quote",
"syn",
]
[[package]]
name = "clap_lex"
version = "0.7.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "afb84c814227b90d6895e01398aee0d8033c00e7466aca416fb6a8e0eb19d8a7"
[[package]]
name = "colorchoice"
version = "1.0.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5b63caa9aa9397e2d9480a9b13673856c78d8ac123288526c37d7839f2a86990"
[[package]]
name = "env_logger"
version = "0.10.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4cd405aab171cb85d6735e5c8d9db038c17d3ca007a4d2c25f337935c3d90580"
dependencies = [
"humantime",
"is-terminal",
"log",
"regex",
"termcolor",
]
[[package]]
name = "heck"
version = "0.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea"
[[package]]
name = "hermit-abi"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fbf6a919d6cf397374f7dfeeea91d974c7c0a7221d0d0f4f20d859d329e53fcc"
[[package]]
name = "humantime"
version = "2.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9a3a5bfb195931eeb336b2a7b4d761daec841b97f947d34394601737a7bba5e4"
[[package]]
name = "indoc"
version = "2.0.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b248f5224d1d606005e02c97f5aa4e88eeb230488bcc03bc9ca4d7991399f2b5"
[[package]]
name = "is-terminal"
version = "0.4.13"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "261f68e344040fbd0edea105bef17c66edf46f984ddb1115b775ce31be948f4b"
dependencies = [
"hermit-abi",
"libc",
"windows-sys 0.52.0",
]
[[package]]
name = "is_terminal_polyfill"
version = "1.70.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7943c866cc5cd64cbc25b2e01621d07fa8eb2a1a23160ee81ce38704e97b8ecf"
[[package]]
name = "itoa"
version = "1.0.13"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "540654e97a3f4470a492cd30ff187bc95d89557a903a2bbf112e2fae98104ef2"
[[package]]
name = "libc"
version = "0.2.164"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "433bfe06b8c75da9b2e3fbea6e5329ff87748f0b144ef75306e674c3f6f7c13f"
[[package]]
name = "libloading"
version = "0.6.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "351a32417a12d5f7e82c368a66781e307834dae04c6ce0cd4456d52989229883"
dependencies = [
"cfg-if",
"winapi",
]
[[package]]
name = "log"
version = "0.4.22"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a7a70ba024b9dc04c27ea2f0c0548feb474ec5c54bba33a7f72f873a39d07b24"
[[package]]
name = "memchr"
version = "2.7.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "78ca9ab1a0babb1e7d5695e3530886289c18cf2f87ec19a575a0abdce112e3a3"
[[package]]
name = "memoffset"
version = "0.9.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "488016bfae457b036d996092f6cb448677611ce4449e970ceaf42695203f218a"
dependencies = [
"autocfg",
]
[[package]]
name = "once_cell"
version = "1.20.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1261fe7e33c73b354eab43b1273a57c8f967d0391e80353e51f764ac02cf6775"
[[package]]
name = "portable-atomic"
version = "1.9.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cc9c68a3f6da06753e9335d63e27f6b9754dd1920d941135b7ea8224f141adb2"
[[package]]
name = "proc-macro2"
version = "1.0.92"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "37d3544b3f2748c54e147655edb5025752e2303145b5aefb3c3ea2c78b973bb0"
dependencies = [
"unicode-ident",
]
[[package]]
name = "pyo3"
version = "0.23.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7ebb0c0cc0de9678e53be9ccf8a2ab53045e6e3a8be03393ceccc5e7396ccb40"
dependencies = [
"cfg-if",
"indoc",
"libc",
"memoffset",
"once_cell",
"portable-atomic",
"pyo3-build-config",
"pyo3-ffi",
"pyo3-macros",
"unindent",
]
[[package]]
name = "pyo3-build-config"
version = "0.23.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "80e3ce69c4ec34476534b490e412b871ba03a82e35604c3dfb95fcb6bfb60c09"
dependencies = [
"once_cell",
"target-lexicon",
]
[[package]]
name = "pyo3-ffi"
version = "0.23.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3b09f311c76b36dfd6dd6f7fa6f9f18e7e46a1c937110d283e80b12ba2468a75"
dependencies = [
"libc",
"pyo3-build-config",
]
[[package]]
name = "pyo3-macros"
version = "0.23.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fd4f74086536d1e1deaff99ec0387481fb3325c82e4e48be0e75ab3d3fcb487a"
dependencies = [
"proc-macro2",
"pyo3-macros-backend",
"quote",
"syn",
]
[[package]]
name = "pyo3-macros-backend"
version = "0.23.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9e77dfeb76b32bbf069144a5ea0a36176ab59c8db9ce28732d0f06f096bbfbc8"
dependencies = [
"heck",
"proc-macro2",
"pyo3-build-config",
"quote",
"syn",
]
[[package]]
name = "qubed_tree"
version = "0.1.0"
dependencies = [
"pyo3",
"rsfdb",
"serde",
"serde_json",
]
[[package]]
name = "quote"
version = "1.0.37"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b5b9d34b8991d19d98081b46eacdd8eb58c6f2b201139f7c5f643cc155a633af"
dependencies = [
"proc-macro2",
]
[[package]]
name = "regex"
version = "1.11.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b544ef1b4eac5dc2db33ea63606ae9ffcfac26c1416a2806ae0bf5f56b201191"
dependencies = [
"aho-corasick",
"memchr",
"regex-automata",
"regex-syntax",
]
[[package]]
name = "regex-automata"
version = "0.4.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "809e8dc61f6de73b46c85f4c96486310fe304c434cfa43669d7b40f711150908"
dependencies = [
"aho-corasick",
"memchr",
"regex-syntax",
]
[[package]]
name = "regex-syntax"
version = "0.8.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2b15c43186be67a4fd63bee50d0303afffcef381492ebe2c5d87f324e1b8815c"
[[package]]
name = "rsfdb"
version = "0.1.0"
source = "git+https://github.com/ecmwf/rsfdb?branch=develop#ab8c9590bba15d22167c274db9238cd9b897baf1"
dependencies = [
"libc",
"libloading",
"once_cell",
"rsfindlibs",
"serde",
"serde_json",
]
[[package]]
name = "rsfindlibs"
version = "0.1.1"
source = "git+https://github.com/ecmwf-projects/rsfindlibs.git#1358b1049bf3e0b581badfc8005a9828a542cdaa"
dependencies = [
"cc",
"clap",
"env_logger",
"libloading",
"log",
]
[[package]]
name = "ryu"
version = "1.0.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f3cb5ba0dc43242ce17de99c180e96db90b235b8a9fdc9543c96d2209116bd9f"
[[package]]
name = "serde"
version = "1.0.215"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6513c1ad0b11a9376da888e3e0baa0077f1aed55c17f50e7b2397136129fb88f"
dependencies = [
"serde_derive",
]
[[package]]
name = "serde_derive"
version = "1.0.215"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ad1e866f866923f252f05c889987993144fb74e722403468a4ebd70c3cd756c0"
dependencies = [
"proc-macro2",
"quote",
"syn",
]
[[package]]
name = "serde_json"
version = "1.0.133"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c7fceb2473b9166b2294ef05efcb65a3db80803f0b03ef86a5fc88a2b85ee377"
dependencies = [
"itoa",
"memchr",
"ryu",
"serde",
]
[[package]]
name = "shlex"
version = "1.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0fda2ff0d084019ba4d7c6f371c95d8fd75ce3524c3cb8fb653a3023f6323e64"
[[package]]
name = "strsim"
version = "0.11.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7da8b5736845d9f2fcb837ea5d9e2628564b3b043a70948a3f0b778838c5fb4f"
[[package]]
name = "syn"
version = "2.0.89"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "44d46482f1c1c87acd84dea20c1bf5ebff4c757009ed6bf19cfd36fb10e92c4e"
dependencies = [
"proc-macro2",
"quote",
"unicode-ident",
]
[[package]]
name = "target-lexicon"
version = "0.12.16"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "61c41af27dd6d1e27b1b16b489db798443478cef1f06a660c96db617ba5de3b1"
[[package]]
name = "termcolor"
version = "1.4.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "06794f8f6c5c898b3275aebefa6b8a1cb24cd2c6c79397ab15774837a0bc5755"
dependencies = [
"winapi-util",
]
[[package]]
name = "unicode-ident"
version = "1.0.14"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "adb9e6ca4f869e1180728b7950e35922a7fc6397f7b641499e8f3ef06e50dc83"
[[package]]
name = "unindent"
version = "0.2.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c7de7d73e1754487cb58364ee906a499937a0dfabd86bcb980fa99ec8c8fa2ce"
[[package]]
name = "utf8parse"
version = "0.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "06abde3611657adf66d383f00b093d7faecc7fa57071cce2578660c9f1010821"
[[package]]
name = "winapi"
version = "0.3.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5c839a674fcd7a98952e593242ea400abe93992746761e38641405d28b00f419"
dependencies = [
"winapi-i686-pc-windows-gnu",
"winapi-x86_64-pc-windows-gnu",
]
[[package]]
name = "winapi-i686-pc-windows-gnu"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6"
[[package]]
name = "winapi-util"
version = "0.1.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cf221c93e13a30d793f7645a0e7762c55d169dbb0a49671918a2319d289b10bb"
dependencies = [
"windows-sys 0.59.0",
]
[[package]]
name = "winapi-x86_64-pc-windows-gnu"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f"
[[package]]
name = "windows-sys"
version = "0.52.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "282be5f36a8ce781fad8c8ae18fa3f9beff57ec1b52cb3de0789201425d9a33d"
dependencies = [
"windows-targets",
]
[[package]]
name = "windows-sys"
version = "0.59.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1e38bc4d79ed67fd075bcc251a1c39b32a1776bbe92e5bef1f0bf1f8c531853b"
dependencies = [
"windows-targets",
]
[[package]]
name = "windows-targets"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9b724f72796e036ab90c1021d4780d4d3d648aca59e491e6b98e725b84e99973"
dependencies = [
"windows_aarch64_gnullvm",
"windows_aarch64_msvc",
"windows_i686_gnu",
"windows_i686_gnullvm",
"windows_i686_msvc",
"windows_x86_64_gnu",
"windows_x86_64_gnullvm",
"windows_x86_64_msvc",
]
[[package]]
name = "windows_aarch64_gnullvm"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "32a4622180e7a0ec044bb555404c800bc9fd9ec262ec147edd5989ccd0c02cd3"
[[package]]
name = "windows_aarch64_msvc"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "09ec2a7bb152e2252b53fa7803150007879548bc709c039df7627cabbd05d469"
[[package]]
name = "windows_i686_gnu"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8e9b5ad5ab802e97eb8e295ac6720e509ee4c243f69d781394014ebfe8bbfa0b"
[[package]]
name = "windows_i686_gnullvm"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0eee52d38c090b3caa76c563b86c3a4bd71ef1a819287c19d586d7334ae8ed66"
[[package]]
name = "windows_i686_msvc"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "240948bc05c5e7c6dabba28bf89d89ffce3e303022809e73deaefe4f6ec56c66"
[[package]]
name = "windows_x86_64_gnu"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "147a5c80aabfbf0c7d901cb5895d1de30ef2907eb21fbbab29ca94c5b08b1a78"
[[package]]
name = "windows_x86_64_gnullvm"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "24d5b23dc417412679681396f2b49f3de8c1473deb516bd34410872eff51ed0d"
[[package]]
name = "windows_x86_64_msvc"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "589f6da84c646204747d1270a2a5661ea66ed1cced2631d546fdfb155959f9ec"

View File

@ -0,0 +1,17 @@
[package]
name = "qubed_tree"
version = "0.1.0"
edition = "2021"
[dependencies]
rsfdb = {git = "https://github.com/ecmwf/rsfdb", branch = "develop"}
serde = { version = "1.0", features = ["derive"] }
serde_json = "1.0"
pyo3 = "0.23.1"
[lib]
name = "tree_traverser"
crate-type = ["cdylib"]
path = "./rust_src/lib.rs"

View File

View File

@ -1,13 +1,27 @@
[build-system]
requires = ["setuptools >= 61.0"]
build-backend = "setuptools.build_meta"
requires = ["maturin>=1.7,<2.0"]
build-backend = "maturin"
[project]
name = "TreeTraverser"
name = "tree_traverser"
description = "Tools to work with compressed Datacubes and Trees"
readme = "README.md"
authors = [
{name = "Tom Hodson", email = "thomas.hodson@ecmwf.int"},
]
classifiers = [
"Programming Language :: Rust",
"Programming Language :: Python :: Implementation :: CPython",
"Programming Language :: Python :: Implementation :: PyPy",
]
requires-python = ">= 3.11"
dynamic = ["version"]
dependencies = [
"fastapi",
"pe"
]
[tool.maturin]
python-source = "python_src"
module-name = "tree_traverser.rust"
features = ["pyo3/extension-module"]

View File

@ -0,0 +1 @@
from . import rust as backend

View File

@ -0,0 +1,88 @@
#![allow(unused_imports)]
#![allow(dead_code)]
#![allow(unused_variables)]
use rsfdb::listiterator::KeyValueLevel;
use rsfdb::request::Request;
use rsfdb::FDB; // Make sure the `fdb` crate is correctly specified in the dependencies
use serde_json::{json, Value};
use std::time::Instant;
use pyo3::prelude::*;
use pyo3::types::{PyDict, PyList, PyString};
use crate::tree::TreeNode;
use std::collections::HashMap;
/// Formats the sum of two numbers as string.
#[pyfunction]
#[pyo3(signature = (request, fdb_config = None))]
fn traverse_fdb(
request: HashMap<String, Vec<String>>,
fdb_config: Option<&str>,
) -> PyResult<String> {
let start_time = Instant::now();
let fdb = FDB::new(fdb_config).unwrap();
let list_request =
Request::from_json(json!(request)).expect("Failed to create request from python dict");
let list = fdb.list(&list_request, true, true).unwrap();
// for item in list {
// for kvl in item.request {
// println!("{:?}", kvl);
// }
// }
let mut root = TreeNode::new(KeyValueLevel {
key: "root".to_string(),
value: "root".to_string(),
level: 0,
});
for item in list {
if let Some(request) = &item.request {
root.insert(&request);
}
}
// Traverse and print the tree
root.traverse(0, &|node, level| {
let indent = " ".repeat(level);
println!("{}{}={}", indent, node.key.key, node.key.value);
});
// Convert the tree to JSON
// let json_output = root.to_json();
// // Print the JSON output
// // println!("{}", serde_json::to_string_pretty(&json_output).unwrap());
// std::fs::write(
// "output.json",
// serde_json::to_string_pretty(&json_output).unwrap(),
// )
// .expect("Unable to write file");
// let duration = start_time.elapsed();
// println!("Total runtime: {:?}", duration);
Ok(("test").to_string())
}
use pyo3::prelude::*;
/// Formats the sum of two numbers as string.
#[pyfunction]
fn sum_as_string(a: usize, b: usize) -> PyResult<String> {
Ok((a + b + 2).to_string())
}
/// A Python module implemented in Rust. The name of this function must match
/// the `lib.name` setting in the `Cargo.toml`, else Python will not be able to
/// import the module.
#[pymodule]
fn rust(m: &Bound<'_, PyModule>) -> PyResult<()> {
m.add_function(wrap_pyfunction!(traverse_fdb, m)?)
}

View File

@ -0,0 +1,66 @@
#[derive(Debug)]
pub struct TreeNode {
key: KeyValueLevel,
children: Vec<TreeNode>,
}
impl TreeNode {
pub fn new(key: KeyValueLevel) -> Self {
TreeNode {
key,
children: Vec::new(),
}
}
pub fn insert(&mut self, path: &[KeyValueLevel]) {
if path.is_empty() {
return;
}
let kvl = &path[0];
// Check if a child with the same key and value exists
if let Some(child) = self.children.iter_mut().find(|child| child.key == *kvl) {
// Insert the remaining path into the existing child
child.insert(&path[1..]);
} else {
// Create a new child node
let mut new_child = TreeNode::new(kvl.clone());
new_child.insert(&path[1..]);
self.children.push(new_child);
}
}
pub fn traverse<F>(&self, level: usize, callback: &F)
where
F: Fn(&TreeNode, usize),
{
callback(self, level);
for child in &self.children {
child.traverse(level + 1, callback);
}
}
pub fn to_json(&self) -> Value {
let formatted_key = format!("{}={}", self.key.key, self.key.value);
let children_json: Value = if self.children.is_empty() {
Value::Object(serde_json::Map::new())
} else {
Value::Object(
self.children
.iter()
.map(|child| {
(
format!("{}={}", child.key.key, child.key.value),
child.to_json(),
)
})
.collect(),
)
};
// Combine the formatted key with children
serde_json::json!({ formatted_key: children_json })
}
}

View File

@ -0,0 +1,26 @@
from tree_traverser import backend
config = """
---
type: remote
host: databridge-prod-catalogue1-ope.ewctest.link
port: 10000
engine: remote
store: remote
"""
def massage_request(r):
return {k : v if isinstance(v, list) else [v]
for k, v in r.items()}
request = {
"class": "d1",
"dataset": "extremes-dt",
"expver": "0001",
"stream": "oper",
"date": ["20241117", "20241116"],
}
backend.traverse_fdb(massage_request(request), fdb_config = config)